STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA29700.1Branched-chain amino acid ABC transporter, permease protein; KEGG: dtu:Dtur_1666 5.8e-12 sugar ABC transporter ATPase K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. (358 aa)    
Predicted Functional Partners:
rbsA
Putative sugar ABC transporter, ATP binding protein; KEGG: amo:Anamo_0156 4.3e-160 ABC-type sugar transport system, ATPase component; K10441 ribose transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
 0.984
KXA29702.1
Hypothetical protein.
 
  
 0.922
KXA29699.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: plm:Plim_0780 1.8e-12 inner-membrane translocator K10440; Belongs to the binding-protein-dependent transport system permease family.
 
    
0.843
psuK
HTH domain protein; KEGG: cbj:H04402_01237 3.1e-70 pseudouridine kinase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.590
KXA29604.1
Hypothetical protein; KEGG: dth:DICTH_0190 6.4e-06 acetyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
     0.479
KXA27787.1
Hypothetical protein; KEGG: fnu:FN1854 5.3e-91 methylaspartate mutase K01846; Psort location: Cytoplasmic, score: 7.50.
 
     0.454
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.