STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA29703.1Hypothetical protein; KEGG: snc:HMPREF0837_11378 6.7e-13 ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00. (228 aa)    
Predicted Functional Partners:
trmL
RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.
      0.740
KXA29704.1
Polysaccharide pyruvyl transferase CsaB; KEGG: csc:Csac_1349 1.5e-61 glycosyl transferase family protein K05946.
       0.545
KXA29705.1
Glycosyltransferase, group 1 family protein; KEGG: csc:Csac_1346 5.5e-89 group 1 glycosyl transferase; K00754; Psort location: Cytoplasmic, score: 7.50.
       0.545
KXA27776.1
FeoA domain protein; KEGG: pmr:PMI0121 0.0077 hypothetical protein; K12500 thioesterase III.
  
     0.519
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
    0.453
KXA28526.1
Hypothetical protein; KEGG: thl:TEH_19930 1.1e-44 putative endonuclease K15051.
 
     0.436
KXA28998.1
Potassium/proton antiporter; KEGG: spw:SPCG_0272 0.0033 cdsA; phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.433
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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