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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA29712.1LytTr DNA-binding domain protein; Psort location: Cytoplasmic, score: 7.50. (146 aa)    
Predicted Functional Partners:
KXA29713.1
Hypothetical protein; KEGG: dtu:Dtur_1250 0.0054 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.945
KXA29711.1
Hypothetical protein; KEGG: cbk:CLL_A0418 0.00033 rdgB; deoxyribonucleotide triphosphate pyrophosphatase; K02428 dITP/XTP pyrophosphatase; Psort location: Cytoplasmic, score: 7.50.
       0.503
proA
Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
   
 
 0.479
cssS
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ssr:SALIVB_0669 1.7e-48 sivK; sensor protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
  
 0.419
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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