STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA29372.1Peptidase family T4; KEGG: pab:PAB0045 2.5e-84 d-aminopeptidase; K01266 D-aminopeptidase; Psort location: Cytoplasmic, score: 7.50. (342 aa)    
Predicted Functional Partners:
gsiD_1
Putative oligopeptide ABC transporter, permease protein AppC; KEGG: pfe:PSF113_0899 3.1e-63 dppC2; protein DppC K12370; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.704
KXA29373.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: pfe:PSF113_0698 3.8e-42 ABC transporter permease K02057; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
       0.520
alsC
Hypothetical protein; KEGG: apb:SAR116_1608 4.2e-43 inner-membrane translocator K02057; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
       0.520
araG_1
KEGG: bse:Bsel_2551 7.0e-160 ABC transporter-like protein; K02056 simple sugar transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78.
       0.520
KXA29369.1
Hypothetical protein; KEGG: ran:Riean_0435 0.0054 ubia prenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.504
KXA29370.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.504
KXA29371.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.504
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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