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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potA_3Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (344 aa)    
Predicted Functional Partners:
potD
KEGG: ebe:B21_01129 2.7e-64 potD; potD, subunit of putrescine/spermidine ABC transporter K11069; Psort location: CytoplasmicMembrane, score: 9.93.
 
 0.997
ydcV
Putative spermidine/putrescine ABC transporter, permease protein PotC; KEGG: aoe:Clos_2538 1.1e-81 ornithine carbamoyltransferase K11070; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.997
potB
Putative spermidine/putrescine ABC transporter, permease protein PotB; KEGG: ebe:B21_01131 1.6e-52 potB; potB, subunit of putrescine/spermidine ABC transporter K11071; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.997
ecsA_2
KEGG: sgg:SGGBAA2069_c09610 1.3e-48 ABC transporter ATP-binding protein K01990; Psort location: CytoplasmicMembrane, score: 8.78.
 
   
0.892
macB_4
Efflux ABC transporter, permease protein; KEGG: car:cauri_0317 8.2e-63 yknZ; Macrolide export ATP-binding/permease macB K02004; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.885
puuR
DNA-binding helix-turn-helix protein; KEGG: cnc:CNE_2c19670 4.0e-15 amaB1; N-carbamoyl-L-amino acid hydrolase AmaB; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.851
KXA31486.1
ABC transporter, ATP-binding protein; KEGG: cbi:CLJ_B1644 4.7e-83 putative multidrug export ATP-binding/permease K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
0.777
KXA29914.1
ABC transporter, ATP-binding protein; KEGG: osp:Odosp_1370 1.2e-95 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
0.701
yecS_1
Putative arginine ABC transporter, permease protein ArtQ; KEGG: rcm:A1E_00665 9.6e-37 sdhA; succinate dehydrogenase flavoprotein subunit K02029; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.665
KXA29377.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.558
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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