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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
htrATrypsin; KEGG: aoe:Clos_2777 7.6e-76 2-alkenal reductase. (419 aa)    
Predicted Functional Partners:
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
   
 0.928
KXA31478.1
Tetratricopeptide repeat protein; KEGG: btl:BALH_3160 6.2e-05 response regulator aspartate phosphatase K06361; Psort location: Cytoplasmic, score: 7.50.
 
 0.857
phaJ
MaoC-like protein; KEGG: hmc:HYPMC_4041 2.6e-34 phosphate butyryltransferase (fragment); Psort location: Cytoplasmic, score: 7.50.
    
 0.849
KXA29649.1
Hypothetical protein; KEGG: ddi:DDB_G0274493 8.1e-14 lig1; DNA ligase I; K10747 DNA ligase 1; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.825
KXA28878.1
TRAP transporter, DctM subunit; KEGG: apb:SAR116_0249 1.1e-67 TRAP dicarboxylate transporter subunit DctM; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
  0.820
lon1
Endopeptidase La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
  
 0.795
alaS_5
alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
 
 0.788
KXA30414.1
Aminotransferase, class V; KEGG: ckl:CKL_3817 5.1e-102 aminotransferase K00837; Psort location: Cytoplasmic, score: 9.67.
    
  0.781
pucG
Aminotransferase, class V; KEGG: lla:L86881 5.0e-79 yeiG; YeiG; K00839 aminotransferase; Psort location: Cytoplasmic, score: 9.97.
    
  0.781
KXA29677.1
Rubredoxin; KEGG: ova:OBV_16090 8.6e-242 acyl-CoA dehydrogenase/protein FixB; Psort location: Cytoplasmic, score: 9.97.
  
 0.770
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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