STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltCLysR substrate binding domain protein; KEGG: shn:Shewana3_3435 3.1e-11 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.67; Belongs to the LysR transcriptional regulatory family. (328 aa)    
Predicted Functional Partners:
KXA30897.1
Transcriptional regulator, AraC family; KEGG: ppo:PPM_0977 3.8e-12 yesN9; chemotaxis response regulator protein-glutamate methylesterase K07720; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.592
melR_1
Transcriptional regulator, AraC family; KEGG: ppo:PPM_0977 1.6e-14 yesN9; chemotaxis response regulator protein-glutamate methylesterase K07720.
  
  
 0.537
melR_2
Transcriptional regulator, AraC family; KEGG: btc:CT43_CH3681 9.4e-16 adaA; ADA regulatory protein; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.525
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.