Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
paaHKEGG: apr:Apre_1352 7.1e-96 3-hydroxybutyryl-CoA dehydrogenase K00074; Psort location: Cytoplasmic, score: 7.50. (278 aa)    
Predicted Functional Partners:
thlA
KEGG: apr:Apre_1351 5.6e-151 acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase; Psort location: Cytoplasmic, score: 9.97; Belongs to the thiolase-like superfamily. Thiolase family.
 0.999
echA8_1
KEGG: ctc:CTC02427 8.7e-75 3-hydroxybutyryl-CoA dehydratase K01715; Psort location: Cytoplasmic, score: 7.50; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.999
KXA29677.1
Rubredoxin; KEGG: ova:OBV_16090 8.6e-242 acyl-CoA dehydrogenase/protein FixB; Psort location: Cytoplasmic, score: 9.97.
 
 0.960
KXA28722.1
KEGG: fnu:FN1535 6.9e-153 acyl-CoA dehydrogenase K00248; Psort location: Cytoplasmic, score: 9.97.
 0.887
KXA31888.1
butyryl-CoA dehydrogenase; KEGG: aoe:Clos_0091 3.8e-145 acyl-CoA dehydrogenase domain-containing protein; K00248 butyryl-CoA dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
 0.885
gctB
KEGG: faa:HMPREF0389_01470 7.2e-119 glutaconate CoA transferase subunit B; K01040 glutaconate CoA-transferase, subunit B; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.815
ldh
KEGG: aur:HMPREF9243_0952 1.8e-60 L-lactate dehydrogenase K00016; Psort location: Cytoplasmic, score: 9.97; Belongs to the LDH/MDH superfamily.
  
 0.782
echA8_2
enoyl-CoA hydratase/isomerase family protein; KEGG: oih:OB0817 5.0e-47 3-hydroxyisobutyryl-CoA hydrolase; Psort location: Cytoplasmic, score: 7.50.
 
 0.780
aldA
KEGG: ssm:Spirs_2638 4.2e-178 aldehyde dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
  
 0.778
KXA29682.1
KEGG: cpr:CPR_1139 1.3e-112 fabF; 3-oxoacyl-(acyl carrier protein) synthase II K09458; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.755
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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