STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tdcB_1Pyridoxal-phosphate dependent protein; KEGG: hbu:Hbut_0216 8.4e-61 threonine dehydratase K01754; Psort location: Cytoplasmic, score: 7.50. (318 aa)    
Predicted Functional Partners:
thrC_5
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate.
 
  
 0.826
KXA29192.1
Putative aspartate transaminase; KEGG: cex:CSE_13400 5.1e-86 aspartate aminotransferase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.787
KXA29193.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.657
porA
KEGG: fma:FMG_0385 0. pyruvate/ferredoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
     
 0.552
metA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
  
 
 0.519
KXA29190.1
Amidohydrolase; KEGG: med:MELS_0417 3.7e-83 amidohydrolase; K01436 amidohydrolase; Psort location: Cytoplasmic, score: 7.50.
  
    0.496
KXA29189.1
Amidohydrolase; KEGG: ebe:B21_01324 2.0e-91 abgB; p-aminobenzoyl-glutamate hydrolase subunit B, subunit of p-aminobenzoyl-glutamate hydrolase K12941; Psort location: Cytoplasmic, score: 7.50.
  
    0.494
hom_2
KEGG: fma:FMG_0319 2.7e-158 homoserine dehydrogenase; K00003 homoserine dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.461
KXA29677.1
Rubredoxin; KEGG: ova:OBV_16090 8.6e-242 acyl-CoA dehydrogenase/protein FixB; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.444
KXA29188.1
Putative sodium/glutamate symporter; KEGG: amv:ACMV_09590 0.0052 nuoH; NADH-quinone oxidoreductase subunit H K00337; Psort location: CytoplasmicMembrane, score: 10.00.
       0.442
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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