STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecfA2_2ABC transporter, ATP-binding protein; KEGG: suq:HMPREF0772_11208 2.2e-44 ABC superfamily ATP binding cassette transporter, ABC protein; Psort location: CytoplasmicMembrane, score: 8.78. (279 aa)    
Predicted Functional Partners:
yvoA
Transcriptional regulator, GntR family; KEGG: ppo:PPM_0985 4.6e-14 ytrA; histidine utilization repressor; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.960
KXA29203.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
KXA29204.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
KXA29205.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
yegW
KEGG: bcz:BCZK3833 8.8e-11 GntR family transcriptional regulator K07979; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.691
KXA31817.1
Putative ATP synthase F0, A subunit; KEGG: del:DelCs14_5778 0.0052 monosaccharide-transporting ATPase K13926; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.602
KXA29200.1
KEGG: btk:BT9727_0893 9.5e-10 CAAX amino terminal protease family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.569
ctc_5
Hypothetical protein; KEGG: ccl:Clocl_0282 2.7e-17 beta-1,4-xylanase; K01181 endo-1,4-beta-xylanase; Psort location: Cellwall, score: 10.00.
 
  
 0.521
purP
Putative permease; KEGG: bcz:BCZK0244 3.7e-99 guanine-hypoxanthine permease; xanthine/uracil permease family protein K06901; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.493
yloB
Putative potassium/sodium efflux P-type ATPase, fungal-type; KEGG: fma:FMG_1563 0. calcium-transporting P-type ATPase; K01537 Ca2+-transporting ATPase; Psort location: CytoplasmicMembrane, score: 9.99.
  
 0.456
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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