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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aspCAminotransferase, class I/II; KEGG: amt:Amet_2618 4.2e-107 aspartate aminotransferase K00812; Psort location: Cytoplasmic, score: 7.50. (398 aa)    
Predicted Functional Partners:
KXA28997.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
KXA28994.1
DnaD domain protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.737
speG
KEGG: bcr:BCAH187_A1733 8.5e-13 GNAT family acetyltransferase; K00676 ribosomal-protein-alanine N-acetyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
    0.708
dnaI_1
Putative DNA replication protein DnaC; KEGG: aae:aq_2053 0.00047 recG; ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG; Psort location: Cytoplasmic, score: 7.50.
       0.700
KXA28998.1
Potassium/proton antiporter; KEGG: spw:SPCG_0272 0.0033 cdsA; phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.613
porA
KEGG: fma:FMG_0385 0. pyruvate/ferredoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.589
KXA28999.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.546
thrC_5
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate.
  
 
 0.528
metA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
  
 
 0.519
pabB
KEGG: ava:Ava_3468 3.2e-148 anthranilate synthase, component II K13950; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.479
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.