STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA28857.1Aminotransferase, class V; KEGG: apr:Apre_0365 6.5e-70 cysteine desulfurase; Psort location: Cytoplasmic, score: 9.97. (374 aa)    
Predicted Functional Partners:
nifU
SUF system FeS assembly protein, NifU family; KEGG: hbo:Hbor_34450 4.6e-08 cysteine desulfurase; Psort location: Cytoplasmic, score: 7.50.
 0.996
KXA28859.1
Selenium metabolism protein YedF; KEGG: drm:Dred_1242 1.5e-24 SirA family protein; K04085 tRNA 2-thiouridine synthesizing protein A; Psort location: Cytoplasmic, score: 7.50.
 
 
 
 0.985
moeZ
ThiF family protein; KEGG: bpb:bpr_I2644 1.1e-42 thiF; thiamine biosynthesis protein ThiF.
 
 
 0.891
KXA28860.1
KEGG: cpy:Cphy_1486 6.3e-88 selenide, water dikinase K01008; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.813
KXA28858.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.778
cymR
Putative HTH-type transcriptional regulator CymR; KEGG: hmc:HYPMC_1094 2.1e-16 Rrf2 family transcriptional regulator K04487; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.624
KXA30393.1
KEGG: apb:SAR116_0013 2.4e-08 BadM/Rrf2 family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.624
thiI
Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
  
 
 0.615
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.521
KXA29692.1
Acyl carrier protein; KEGG: eci:UTI89_C1220 1.1e-12 acpP; acyl carrier protein K02078; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.521
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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