STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA28859.1Selenium metabolism protein YedF; KEGG: drm:Dred_1242 1.5e-24 SirA family protein; K04085 tRNA 2-thiouridine synthesizing protein A; Psort location: Cytoplasmic, score: 7.50. (192 aa)    
Predicted Functional Partners:
KXA28857.1
Aminotransferase, class V; KEGG: apr:Apre_0365 6.5e-70 cysteine desulfurase; Psort location: Cytoplasmic, score: 9.97.
 
 
 
 0.985
KXA28860.1
KEGG: cpy:Cphy_1486 6.3e-88 selenide, water dikinase K01008; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.960
nifS
KEGG: clb:Clo1100_2273 4.1e-100 cysteine desulfurase NifS; K04487 cysteine desulfurase; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.867
iscS_2
Putative cysteine desulfurase; KEGG: toc:Toce_1465 7.4e-85 class V aminotransferase; K04487 cysteine desulfurase; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.867
KXA28861.1
tRNA 2-selenouridine synthase; KEGG: fma:FMG_1611 4.0e-70 putative ATP/GTP binding protein; K06917 tRNA 2-selenouridine synthase; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.759
KXA28858.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.664
KXA31867.1
Rhodanese-like protein; KEGG: sub:SUB0808 1.5e-14 pyridine nucleotide-disulfide oxidoreductase family protein; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.428
hgdB_8
KEGG: fnu:FN0208 1.3e-160 (R)-2-hydroxyglutaryl-CoA dehydratase beta-subunit K01726; Psort location: Cytoplasmic, score: 7.50.
  
    0.400
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.