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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ltaSArylsulfatase; KEGG: gka:GK0211 2.5e-61 sulfatase K01138. (609 aa)    
Predicted Functional Partners:
KXA28867.1
Lipid kinase, YegS/Rv2252/BmrU family; KEGG: hhd:HBHAL_1619 1.6e-20 dagK; diacylglycerol kinase K07029; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.645
ltaS1
Arylsulfatase; KEGG: bmd:BMD_0202 3.1e-47 sulfatase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.576
KXA28868.1
XkdX family protein; KEGG: bas:BUsg536 1.7e-06 murI; glutamate racemase; K01776 glutamate racemase; Psort location: Cytoplasmic, score: 7.50; Belongs to the aspartate/glutamate racemases family.
  
    0.572
KXA28866.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.555
dagK
Lipid kinase, YegS/Rv2252/BmrU family; KEGG: ppo:PPM_0837 2.2e-46 yerQ; lipid kinase yegS K07029; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.483
KXA31872.1
Hypothetical protein; KEGG: dra:DR_0309 8.3e-10 tuf; elongation factor Tu K02358; Psort location: Cytoplasmic, score: 9.67.
 
  
 0.443
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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