Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KXA28868.1XkdX family protein; KEGG: bas:BUsg536 1.7e-06 murI; glutamate racemase; K01776 glutamate racemase; Psort location: Cytoplasmic, score: 7.50; Belongs to the aspartate/glutamate racemases family. (212 aa)    
Predicted Functional Partners:
KXA28867.1
Lipid kinase, YegS/Rv2252/BmrU family; KEGG: hhd:HBHAL_1619 1.6e-20 dagK; diacylglycerol kinase K07029; Psort location: Cytoplasmic, score: 7.50.
       0.774
KXA28866.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.773
ltaS
Arylsulfatase; KEGG: gka:GK0211 2.5e-61 sulfatase K01138.
  
    0.572
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
    0.404
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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