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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA28875.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (283 aa)    
Predicted Functional Partners:
KXA28877.1
TRAP transporter, DctQ-like membrane protein; KEGG: apb:SAR116_0248 0.00022 C4-dicarboxylate transport system, permease small protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.785
KXA28876.1
TRAP transporter solute receptor, DctP family; KEGG: cnc:CNE_2c21430 1.9e-40 dhaT; 1,3-propanediol dehydrogenase DhaT; Psort location: Cytoplasmic, score: 7.50.
       0.782
KXA28878.1
TRAP transporter, DctM subunit; KEGG: apb:SAR116_0249 1.1e-67 TRAP dicarboxylate transporter subunit DctM; Psort location: CytoplasmicMembrane, score: 10.00.
       0.743
KXA28874.1
LysR substrate binding domain protein; KEGG: shn:Shewana3_3435 1.3e-11 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
 
    0.697
tadA
Cytidine and deoxycytidylate deaminase zinc-binding region; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
    
  0.518
KXA29603.1
Hypothetical protein; KEGG: ddi:DDB_G0274493 4.1e-16 lig1; DNA ligase I; K10747 DNA ligase 1.
  
     0.465
KXA31603.1
Hypothetical protein; KEGG: mvo:Mvol_0543 2.2e-06 UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 7.50.
 
     0.437
porA
KEGG: fma:FMG_0385 0. pyruvate/ferredoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
     
 0.430
lacC
Hypothetical protein; KEGG: cbk:CLL_A3126 8.9e-18 pfkB; 1-phosphofructokinase K00917; Psort location: Cytoplasmic, score: 7.50.
  
     0.401
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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