STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA28876.1TRAP transporter solute receptor, DctP family; KEGG: cnc:CNE_2c21430 1.9e-40 dhaT; 1,3-propanediol dehydrogenase DhaT; Psort location: Cytoplasmic, score: 7.50. (333 aa)    
Predicted Functional Partners:
KXA28878.1
TRAP transporter, DctM subunit; KEGG: apb:SAR116_0249 1.1e-67 TRAP dicarboxylate transporter subunit DctM; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.996
KXA28877.1
TRAP transporter, DctQ-like membrane protein; KEGG: apb:SAR116_0248 0.00022 C4-dicarboxylate transport system, permease small protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.979
KXA28875.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.782
kdgR
IclR helix-turn-helix protein; KEGG: hiq:CGSHiGG_08780 4.4e-16 araD; L-ribulose-5-phosphate 4-epimerase; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.519
KXA28874.1
LysR substrate binding domain protein; KEGG: shn:Shewana3_3435 1.3e-11 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
     
 0.492
KXA28632.1
IclR helix-turn-helix protein; KEGG: cnc:CNE_2c17880 8.3e-09 mdlB; (S)-mandelate dehydrogenase MdlB; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.456
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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