Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KXA28878.1TRAP transporter, DctM subunit; KEGG: apb:SAR116_0249 1.1e-67 TRAP dicarboxylate transporter subunit DctM; Psort location: CytoplasmicMembrane, score: 10.00. (427 aa)    
Predicted Functional Partners:
KXA28876.1
TRAP transporter solute receptor, DctP family; KEGG: cnc:CNE_2c21430 1.9e-40 dhaT; 1,3-propanediol dehydrogenase DhaT; Psort location: Cytoplasmic, score: 7.50.
  
 0.996
KXA28877.1
TRAP transporter, DctQ-like membrane protein; KEGG: apb:SAR116_0248 0.00022 C4-dicarboxylate transport system, permease small protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.993
KXA28875.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.744
htrA
Trypsin; KEGG: aoe:Clos_2777 7.6e-76 2-alkenal reductase.
   
 
  0.712
KXA30414.1
Aminotransferase, class V; KEGG: ckl:CKL_3817 5.1e-102 aminotransferase K00837; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.675
pucG
Aminotransferase, class V; KEGG: lla:L86881 5.0e-79 yeiG; YeiG; K00839 aminotransferase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.675
phaJ
MaoC-like protein; KEGG: hmc:HYPMC_4041 2.6e-34 phosphate butyryltransferase (fragment); Psort location: Cytoplasmic, score: 7.50.
    
 0.661
KXA31799.1
Hypothetical protein; KEGG: efu:HMPREF0351_11193 2.7e-55 dihydrodipicolinate synthase/N-acetylneuraminate lyase; Psort location: Cytoplasmic, score: 7.50.
    
  0.654
fni
Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
    
  0.654
lon1
Endopeptidase La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
     
  0.610
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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