STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uppPUndecaprenyl-diphosphatase UppP; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. (315 aa)    
Predicted Functional Partners:
ramA
Hydrolase, carbon-nitrogen family; KEGG: rno:288174 1.9e-47 Nit2, MGC124762, RGD1310494; nitrilase family, member 2 K13566; Psort location: Cytoplasmic, score: 7.50.
       0.774
dnaC
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
       0.695
rplI
Ribosomal protein L9; Binds to the 23S rRNA.
       0.695
nrnA_1
DHHA1 domain protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.
       0.694
KXA28884.1
Hypothetical protein; KEGG: clp:CPK_ORF00408 0.0067 putative CDP-diacylglycerol--serine O-phosphatidyltransferase; K00998 phosphatidylserine synthase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.684
uppS
Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
    
 0.618
KXA29005.1
Hypothetical protein; KEGG: mpx:MPD5_0800 2.3e-161 hypothetical protein; K14205 phosphatidylglycerol lysyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.463
KXA28885.1
EDD domain protein, DegV family; KEGG: mgf:MGF_3873 2.7e-25 DegV-like protein; Psort location: Cytoplasmic, score: 7.50.
       0.411
prkC
Putative serine/threonine-protein kinase PrkC; KEGG: ctc:CTC01225 4.9e-104 serine/threonine protein kinase K08884; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.404
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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