close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA28885.1EDD domain protein, DegV family; KEGG: mgf:MGF_3873 2.7e-25 DegV-like protein; Psort location: Cytoplasmic, score: 7.50. (280 aa)    
Predicted Functional Partners:
KXA31457.1
DAK2 domain fusion protein YloV; KEGG: bcz:BCZK3615 4.8e-122 dhaK; dihydroxyacetone-related kinase K07030; Psort location: Cytoplasmic, score: 7.50.
 
 0.992
KXA28886.1
Transcriptional regulator, MarR family; KEGG: bsr:I33_0254 0.00017 YbfA.
 
     0.677
KXA31456.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
    0.615
rplI
Ribosomal protein L9; Binds to the 23S rRNA.
  
    0.490
KXA28884.1
Hypothetical protein; KEGG: clp:CPK_ORF00408 0.0067 putative CDP-diacylglycerol--serine O-phosphatidyltransferase; K00998 phosphatidylserine synthase; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.473
nrnA_1
DHHA1 domain protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.
  
    0.471
dnaC
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
       0.449
ramA
Hydrolase, carbon-nitrogen family; KEGG: rno:288174 1.9e-47 Nit2, MGC124762, RGD1310494; nitrilase family, member 2 K13566; Psort location: Cytoplasmic, score: 7.50.
       0.414
uppP
Undecaprenyl-diphosphatase UppP; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.411
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.