STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sdhAKEGG: faa:HMPREF0389_01609 5.1e-102 L-serine dehydratase, iron-sulfur-dependent subunit alpha; K01752 L-serine dehydratase; Psort location: Cytoplasmic, score: 7.50. (293 aa)    
Predicted Functional Partners:
sdhB
KEGG: faa:HMPREF0389_01608 2.6e-73 L-serine dehydratase, iron-sulfur-dependent subunit beta; K01752 L-serine dehydratase.
  
 0.998
sstT
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
    0.790
thrC_5
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate.
  
  
 0.557
fabG
Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: fma:FMG_0818 1.3e-66 3-oxoacyl-[acyl-carrier protein] reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.538
abgT
AbgT transporter family protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.498
folD
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
     
 0.440
gcvT
KEGG: elm:ELI_0269 9.9e-90 putative glycine cleavage system T protein; K00605 aminomethyltransferase; Psort location: Cytoplasmic, score: 9.97; Belongs to the GcvT family.
 
  
 0.419
porA
KEGG: fma:FMG_0385 0. pyruvate/ferredoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.401
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.