STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsiC_1ABC transporter, permease protein; KEGG: amt:Amet_2908 8.9e-89 nickel-transporting ATPase K02033; Psort location: CytoplasmicMembrane, score: 10.00. (319 aa)    
Predicted Functional Partners:
gsiD_1
Putative oligopeptide ABC transporter, permease protein AppC; KEGG: pfe:PSF113_0899 3.1e-63 dppC2; protein DppC K12370; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.999
gsiA_1
Putative oligopeptide ABC transporter, ATP-binding protein OppD; KEGG: cle:Clole_3784 8.4e-93 peptide ABC transporter ATPase K02031; Psort location: CytoplasmicMembrane, score: 9.96.
 0.999
appA
ABC transporter, substrate-binding protein, family 5; KEGG: gwc:GWCH70_0479 2.3e-58 4-phytase K02035; Psort location: Cellwall, score: 9.07.
 
 0.997
gsiA_2
Oligopeptide ABC transporter, ATP-binding protein OppF; KEGG: lbh:Lbuc_1821 5.3e-68 nickel-transporting ATPase K10823; Psort location: CytoplasmicMembrane, score: 9.96.
  
 0.992
murAA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
     
 0.667
ykoD_4
KEGG: sgg:SGGBAA2069_c10700 4.0e-125 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.661
dnaJ_1
DnaJ domain protein; KEGG: cre:CHLREDRAFT_195902 0.00027 DNJ3; DnaJ-like protein; K09584 protein disulfide-isomerase A6; Psort location: CytoplasmicMembrane, score: 9.55.
  
  
 0.570
KXA28907.1
Hypothetical protein; KEGG: mpe:MYPE6470 0.0030 DNA topoisomerase IV subunit A; K02621 topoisomerase IV subunit A; Psort location: Cytoplasmic, score: 7.50.
       0.535
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
  
  
 0.485
KXA28900.1
Aminotransferase, class I/II; KEGG: clj:CLJU_c29390 1.1e-88 aminotransferase; Psort location: Cytoplasmic, score: 7.50.
       0.458
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.