STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsiA_1Putative oligopeptide ABC transporter, ATP-binding protein OppD; KEGG: cle:Clole_3784 8.4e-93 peptide ABC transporter ATPase K02031; Psort location: CytoplasmicMembrane, score: 9.96. (318 aa)    
Predicted Functional Partners:
gsiC_1
ABC transporter, permease protein; KEGG: amt:Amet_2908 8.9e-89 nickel-transporting ATPase K02033; Psort location: CytoplasmicMembrane, score: 10.00.
 0.999
gsiD_1
Putative oligopeptide ABC transporter, permease protein AppC; KEGG: pfe:PSF113_0899 3.1e-63 dppC2; protein DppC K12370; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.999
appA
ABC transporter, substrate-binding protein, family 5; KEGG: gwc:GWCH70_0479 2.3e-58 4-phytase K02035; Psort location: Cellwall, score: 9.07.
  
 0.963
gsiA_2
Oligopeptide ABC transporter, ATP-binding protein OppF; KEGG: lbh:Lbuc_1821 5.3e-68 nickel-transporting ATPase K10823; Psort location: CytoplasmicMembrane, score: 9.96.
 
  
0.959
yusV
KEGG: cth:Cthe_0548 1.4e-44 ABC transporter-like protein; K09817 zinc transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78.
 
    
0.901
cysA
KEGG: sgo:SGO_2099 1.2e-52 ABC transporter ATP-binding protein K15600; Psort location: CytoplasmicMembrane, score: 8.78.
 
     
0.900
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
     
0.900
KXA31878.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_4036 3.1e-47 taurine-transporting AtPase K02049; Psort location: CytoplasmicMembrane, score: 9.96.
 
     
0.898
KXA30403.1
Putative ferrichrome ABC transporter, ATP-binding protein FhuC; KEGG: sgy:Sgly_1488 2.0e-61 iron ABC transporter ATPase; K02013 iron complex transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
     
0.894
ykoD_4
KEGG: sgg:SGGBAA2069_c10700 4.0e-125 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
0.696
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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