node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXA28921.1 | cshA | HMPREF3229_01553 | HMPREF3229_00449 | BRCA1 protein; KEGG: sri:SELR_11040 5.1e-70 hypothetical protein; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 9.97. | KEGG: apr:Apre_1083 6.4e-134 DEAD/DEAH box helicase; K05592 ATP-dependent RNA helicase DeaD; Psort location: Cytoplasmic, score: 9.97. | 0.773 |
KXA28921.1 | dnaE | HMPREF3229_01553 | HMPREF3229_00291 | BRCA1 protein; KEGG: sri:SELR_11040 5.1e-70 hypothetical protein; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 9.97. | KEGG: txy:Thexy_0632 0. DNA polymerase III subunit alpha K02337; Psort location: Cytoplasmic, score: 9.97. | 0.957 |
KXA28921.1 | dnaN | HMPREF3229_01553 | HMPREF3229_00723 | BRCA1 protein; KEGG: sri:SELR_11040 5.1e-70 hypothetical protein; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 9.97. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.961 |
KXA28921.1 | dnaX_2 | HMPREF3229_01553 | HMPREF3229_01225 | BRCA1 protein; KEGG: sri:SELR_11040 5.1e-70 hypothetical protein; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 9.97. | DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.770 |
KXA28921.1 | gltX | HMPREF3229_01553 | HMPREF3229_01459 | BRCA1 protein; KEGG: sri:SELR_11040 5.1e-70 hypothetical protein; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 9.97. | glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.771 |
KXA28921.1 | rplE | HMPREF3229_01553 | HMPREF3229_01744 | BRCA1 protein; KEGG: sri:SELR_11040 5.1e-70 hypothetical protein; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 9.97. | Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.777 |
KXA28921.1 | rplJ | HMPREF3229_01553 | HMPREF3229_00303 | BRCA1 protein; KEGG: sri:SELR_11040 5.1e-70 hypothetical protein; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 9.97. | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.790 |
KXA28921.1 | rplX | HMPREF3229_01553 | HMPREF3229_01743 | BRCA1 protein; KEGG: sri:SELR_11040 5.1e-70 hypothetical protein; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 9.97. | Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.770 |
KXA28921.1 | rpmD | HMPREF3229_01553 | HMPREF3229_01750 | BRCA1 protein; KEGG: sri:SELR_11040 5.1e-70 hypothetical protein; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 9.97. | Ribosomal protein L30; KEGG: apb:SAR116_2409 5.9e-05 50S ribosomal protein L30 K02907. | 0.803 |
KXA28921.1 | uvrC | HMPREF3229_01553 | HMPREF3229_00888 | BRCA1 protein; KEGG: sri:SELR_11040 5.1e-70 hypothetical protein; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 9.97. | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.920 |
cshA | KXA28921.1 | HMPREF3229_00449 | HMPREF3229_01553 | KEGG: apr:Apre_1083 6.4e-134 DEAD/DEAH box helicase; K05592 ATP-dependent RNA helicase DeaD; Psort location: Cytoplasmic, score: 9.97. | BRCA1 protein; KEGG: sri:SELR_11040 5.1e-70 hypothetical protein; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 9.97. | 0.773 |
cshA | gltX | HMPREF3229_00449 | HMPREF3229_01459 | KEGG: apr:Apre_1083 6.4e-134 DEAD/DEAH box helicase; K05592 ATP-dependent RNA helicase DeaD; Psort location: Cytoplasmic, score: 9.97. | glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.451 |
cshA | rplJ | HMPREF3229_00449 | HMPREF3229_00303 | KEGG: apr:Apre_1083 6.4e-134 DEAD/DEAH box helicase; K05592 ATP-dependent RNA helicase DeaD; Psort location: Cytoplasmic, score: 9.97. | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.917 |
cshA | rplX | HMPREF3229_00449 | HMPREF3229_01743 | KEGG: apr:Apre_1083 6.4e-134 DEAD/DEAH box helicase; K05592 ATP-dependent RNA helicase DeaD; Psort location: Cytoplasmic, score: 9.97. | Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.954 |
cshA | rpmD | HMPREF3229_00449 | HMPREF3229_01750 | KEGG: apr:Apre_1083 6.4e-134 DEAD/DEAH box helicase; K05592 ATP-dependent RNA helicase DeaD; Psort location: Cytoplasmic, score: 9.97. | Ribosomal protein L30; KEGG: apb:SAR116_2409 5.9e-05 50S ribosomal protein L30 K02907. | 0.949 |
dnaE | KXA28921.1 | HMPREF3229_00291 | HMPREF3229_01553 | KEGG: txy:Thexy_0632 0. DNA polymerase III subunit alpha K02337; Psort location: Cytoplasmic, score: 9.97. | BRCA1 protein; KEGG: sri:SELR_11040 5.1e-70 hypothetical protein; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 9.97. | 0.957 |
dnaE | dnaN | HMPREF3229_00291 | HMPREF3229_00723 | KEGG: txy:Thexy_0632 0. DNA polymerase III subunit alpha K02337; Psort location: Cytoplasmic, score: 9.97. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.955 |
dnaE | dnaX_2 | HMPREF3229_00291 | HMPREF3229_01225 | KEGG: txy:Thexy_0632 0. DNA polymerase III subunit alpha K02337; Psort location: Cytoplasmic, score: 9.97. | DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.969 |
dnaN | KXA28921.1 | HMPREF3229_00723 | HMPREF3229_01553 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | BRCA1 protein; KEGG: sri:SELR_11040 5.1e-70 hypothetical protein; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 9.97. | 0.961 |
dnaN | dnaE | HMPREF3229_00723 | HMPREF3229_00291 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | KEGG: txy:Thexy_0632 0. DNA polymerase III subunit alpha K02337; Psort location: Cytoplasmic, score: 9.97. | 0.955 |