STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA28943.1Recombinase, phage RecT family; Psort location: Cytoplasmic, score: 7.50. (272 aa)    
Predicted Functional Partners:
KXA28947.1
VRR-NUC domain protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.824
KXA28942.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.773
KXA28946.1
Hypothetical protein; KEGG: cci:CC1G_12482 2.8e-07 exopolyphosphatase; K01514 exopolyphosphatase.
  
    0.769
KXA28945.1
Metallo-beta-lactamase domain protein; KEGG: sud:ST398NM01_2943 1.8e-26 Metal-dependent hydrolase; Psort location: Cytoplasmic, score: 7.50.
       0.763
KXA28934.1
Hypothetical protein; KEGG: fnu:FN0522 2.1e-18 exonuclease SbcC K03546; Psort location: Cytoplasmic, score: 7.50.
 
     0.747
KXA28944.1
Hypothetical protein.
       0.741
KXA28948.1
Hypothetical protein.
       0.735
KXA28949.1
Hypothetical protein.
       0.726
KXA28940.1
KEGG: shn:Shewana3_3590 2.0e-11 single-strand binding protein K03111; Psort location: Cytoplasmic, score: 9.67.
     
 0.595
KXA28941.1
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein; KEGG: stk:STP_1110 1.5e-06 folD; FolD bifunctional protein; K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase; Psort location: Cytoplasmic, score: 7.50.
       0.554
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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