STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA28632.1IclR helix-turn-helix protein; KEGG: cnc:CNE_2c17880 8.3e-09 mdlB; (S)-mandelate dehydrogenase MdlB; Psort location: Cytoplasmic, score: 7.50. (251 aa)    
Predicted Functional Partners:
kipI
TIGR00370 family protein; KEGG: fnu:FN0437 9.1e-80 allophanate hydrolase; Psort location: Cytoplasmic, score: 7.50.
  
    0.648
KXA31794.1
Biotin-dependent carboxylase domain protein; KEGG: fnu:FN0436 8.8e-82 urea carboxylase; Psort location: Cytoplasmic, score: 7.50.
  
    0.643
KXA28631.1
Agmatinase family protein; KEGG: afn:Acfer_2004 9.6e-140 Arginase/agmatinase/formiminoglutamase; K01480 agmatinase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.639
KXA28633.1
Metal ion transporter, metal ion transporter family; KEGG: hiq:CGSHiGG_02375 1.2e-15 argininosuccinate synthase; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.636
ydfH
Transcriptional regulator, GntR family; KEGG: cnc:CNE_2c19120 3.2e-13 phnA2; phosphonoacetate hydrolase PhnA; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.593
KXA31795.1
Hypothetical protein; KEGG: cnc:CNE_2c17030 3.0e-72 alpH; allophanate hydrolase AlpH; Psort location: Cytoplasmic, score: 7.50; Belongs to the D-glutamate cyclase family.
  
    0.503
psuK
HTH domain protein; KEGG: cbj:H04402_01237 3.1e-70 pseudouridine kinase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.464
KXA28876.1
TRAP transporter solute receptor, DctP family; KEGG: cnc:CNE_2c21430 1.9e-40 dhaT; 1,3-propanediol dehydrogenase DhaT; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.456
KXA31792.1
Transporter, branched chain amino acid:cation symporter family protein; KEGG: bqy:MUS_0397 3.6e-108 ycsG; argininosuccinate synthase; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.445
pxpA
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
    0.443
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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