STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA28644.1Hypothetical protein; KEGG: nko:Niako_6902 0.0033 ATP synthase F0 subcomplex subunit A; K02108 F-type H+-transporting ATPase subunit a; Psort location: CytoplasmicMembrane, score: 9.55. (112 aa)    
Predicted Functional Partners:
KXA28643.1
Hypothetical protein; Psort location: Extracellular, score: 8.91.
       0.773
rlmCD
23S rRNA (uracil-5-)-methyltransferase RumA; KEGG: aoe:Clos_0725 6.8e-130 RNA methyltransferase; K00599; Psort location: Cytoplasmic, score: 7.50; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
       0.651
KXA28641.1
KEGG: crn:CAR_c20640 5.3e-107 phosphonate ABC transporter substrate-binding protein K02044.
       0.431
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.