STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA28652.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (413 aa)    
Predicted Functional Partners:
KXA28653.1
Transcriptional regulator, PadR family; KEGG: ase:ACPL_2208 5.9e-05 Coproporphyrinogen 3 oxidase, aerobic; Psort location: Cytoplasmic, score: 7.50.
      0.939
cpnA
Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: lbh:Lbuc_0059 1.0e-41 3-oxoacyl-ACP reductase; Psort location: Cytoplasmic, score: 9.95.
       0.547
KXA28651.1
Methyltransferase domain protein; KEGG: afm:AFUA_5G15020 6.2e-12 arsenic methyltransferase Cyt19 K07755; Psort location: CytoplasmicMembrane, score: 8.16.
       0.407
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.