Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ydaFAcetyltransferase, GNAT family; KEGG: bnm:BALAC2494_00560 2.2e-46 Acyltransferase transferring groups other than amino-acyl groups; Psort location: Cytoplasmic, score: 7.50. (179 aa)    
Predicted Functional Partners:
KXA28665.1
DNA-binding helix-turn-helix protein; KEGG: mmo:MMOB3450 0.00014 dam; adenine-specific DNA methyltransferase K06223; Psort location: Cytoplasmic, score: 7.50.
  
    0.780
KXA28666.1
Hypothetical protein.
       0.773
KXA28668.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
KXA28669.1
Transporter, major facilitator family protein; KEGG: ssr:SALIVB_1450 0.00078 coaE; Dephospho-CoA kinase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.620
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
  
    0.606
KXA28664.1
Hypothetical protein; Psort location: Extracellular, score: 8.91.
       0.562
KXA28670.1
Na/Pi-cotransporter II-like protein; KEGG: stj:SALIVA_0487 7.1e-80 pgk; phosphoglycerate kinase; Psort location: CytoplasmicMembrane, score: 9.55.
 
    0.524
glyQ
glycine--tRNA ligase, alpha subunit; KEGG: cdc:CD196_2278 2.8e-117 glyQ; glycyl-tRNA synthetase subunit alpha; K01878 glycyl-tRNA synthetase alpha chain; Psort location: Cytoplasmic, score: 9.97.
  
    0.429
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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