Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bcrC_2PAP2 family protein; KEGG: cbj:H04402_00358 5.4e-27 phosphatidylglycerophosphatase B; Psort location: CytoplasmicMembrane, score: 10.00. (187 aa)    
Predicted Functional Partners:
cmpR
LysR substrate binding domain protein; KEGG: mct:MCR_1819 1.5e-15 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.67; Belongs to the LysR transcriptional regulatory family.
     
 0.775
rplF
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
   
  0.775
KXA29459.1
Putativeadenylate synthase; KEGG: apr:Apre_1763 1.1e-188 AMP-dependent synthetase and ligase; K04783 yersiniabactin salicyl-AMP ligase; Psort location: Cytoplasmic, score: 9.97.
   
 0.717
KXA29460.1
AMP-binding enzyme; KEGG: bur:Bcep18194_B0672 1.8e-166 non-ribosomal peptide synthetase modules K12239; Psort location: Cytoplasmic, score: 9.97.
   
 0.717
ntpC
ATP synthase, subunit C; KEGG: fma:FMG_1076 2.2e-69 V-type ATP synthase subunit C; K02119 V-type H+-transporting ATPase subunit C; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.528
KXA27761.1
ATP synthase, subunit C; KEGG: fma:FMG_1171 7.5e-37 V-type sodium ATP synthase subunit C; K02119 V-type H+-transporting ATPase subunit C; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.528
KXA28678.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.467
msrAB
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 
 0.418
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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