STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
melR_1Transcriptional regulator, AraC family; KEGG: ppo:PPM_0977 1.6e-14 yesN9; chemotaxis response regulator protein-glutamate methylesterase K07720. (211 aa)    
Predicted Functional Partners:
KXA29913.1
Transcriptional regulator, AraC family; KEGG: bay:RBAM_037970 2.2e-10 adaA; AdaA K13530; Psort location: Cytoplasmic, score: 9.67.
  
     0.715
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 
 0.558
KXA28874.1
LysR substrate binding domain protein; KEGG: shn:Shewana3_3435 1.3e-11 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.554
gltC
LysR substrate binding domain protein; KEGG: shn:Shewana3_3435 3.1e-11 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.67; Belongs to the LysR transcriptional regulatory family.
  
  
 0.537
mepA_5
MATE efflux family protein; KEGG: rcp:RCAP_rcc02680 1.9e-14 mdtK; multidrug resistance protein MdtK K03327; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.524
cmpR
LysR substrate binding domain protein; KEGG: mct:MCR_1819 1.5e-15 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.67; Belongs to the LysR transcriptional regulatory family.
 
  
 0.517
KXA29469.1
KEGG: bcz:BCZK3497 2.8e-10 adaA; AraC family transcriptional regulator K13530.
  
     0.474
ccpA
Putative glucose-resistance amylase regulator; KEGG: apr:Apre_0881 1.3e-80 LacI family transcriptional regulator K02529; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.465
dltB
Alginate O-acetyltransferase AlgI domain protein; KEGG: zga:zobellia_3777 1.8e-81 algI2; poly(beta-D-mannuronate) O-acetylase; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the membrane-bound acyltransferase family.
       0.432
KXA31393.1
KEGG: pmq:PM3016_1208 4.0e-08 AdaA protein; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase.
  
     0.414
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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