Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
clcAPutative ATP synthase F0, A subunit; KEGG: cpr:CPR_1400 8.3e-86 chloride channel protein K01529; Psort location: CytoplasmicMembrane, score: 10.00. (508 aa)    
Predicted Functional Partners:
KXA28683.1
Hypothetical protein; KEGG: apo:Arcpr_0662 0.0025 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923; Psort location: Cytoplasmic, score: 7.50.
       0.773
porA
KEGG: fma:FMG_0385 0. pyruvate/ferredoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.704
rsmB
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
 
 0.643
ktrB
KEGG: ttm:Tthe_0887 8.8e-82 TrkH family potassium uptake protein K03498; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.627
trkG
Potassium uptake protein, TrkH family; KEGG: ssr:SALIVB_0283 4.7e-67 DNA polymerase IV K03498; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.627
nnr_2
YjeF-like protein; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
     
 0.578
mepA_5
MATE efflux family protein; KEGG: rcp:RCAP_rcc02680 1.9e-14 mdtK; multidrug resistance protein MdtK K03327; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.578
copA
Copper-exporting ATPase; KEGG: apr:Apre_0987 8.9e-264 heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.539
yfaY
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 5.6e-13 fadD; long-chain-fatty-acid--CoA ligase K03743; Psort location: Cytoplasmic, score: 7.50; Belongs to the CinA family.
 
  
 0.506
ycaM
Amino acid permease; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 
 0.500
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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