STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clcAPutative ATP synthase F0, A subunit; KEGG: cpr:CPR_1400 8.3e-86 chloride channel protein K01529; Psort location: CytoplasmicMembrane, score: 10.00. (508 aa)    
Predicted Functional Partners:
porA
KEGG: fma:FMG_0385 0. pyruvate/ferredoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.797
KXA28683.1
Hypothetical protein; KEGG: apo:Arcpr_0662 0.0025 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923; Psort location: Cytoplasmic, score: 7.50.
       0.773
ktrB
KEGG: ttm:Tthe_0887 8.8e-82 TrkH family potassium uptake protein K03498; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.741
trkG
Potassium uptake protein, TrkH family; KEGG: ssr:SALIVB_0283 4.7e-67 DNA polymerase IV K03498; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.741
rsmB
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
   0.668
nnr_2
YjeF-like protein; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
     
 0.599
mepA_5
MATE efflux family protein; KEGG: rcp:RCAP_rcc02680 1.9e-14 mdtK; multidrug resistance protein MdtK K03327; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.588
ycaM
Amino acid permease; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 
 0.572
purL
KEGG: apr:Apre_1107 0. phosphoribosylformylglycinamidine synthase K01952; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.517
KXA31887.1
KEGG: apb:SAR116_0757 3.2e-06 universal stress protein family protein.
  
  
 0.516
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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