Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
norVMetallo-beta-lactamase domain protein; KEGG: rci:RCIX2263 2.0e-59 fprA-2; F420H2 oxidase; Psort location: Cytoplasmic, score: 9.97. (403 aa)    
Predicted Functional Partners:
KXA31881.1
KEGG: fma:FMG_0046 4.8e-42 superoxide reductase; K05919 superoxide reductase.
 
  
 0.655
KXA29676.1
Metallo-beta-lactamase domain protein; KEGG: eci:UTI89_C3072 5.0e-47 norV; anaerobic nitric oxide reductase flavorubredoxin K12264; Psort location: Cytoplasmic, score: 9.97.
 
  
0.567
ttcA
PP-loop family protein; KEGG: fbl:Fbal_1913 3.4e-32 tRNA s(2)C-32 sulfurtransferase K14058; Psort location: Cytoplasmic, score: 7.50; Belongs to the TtcA family.
       0.546
rub
Rubredoxin; KEGG: sat:SYN_02123 3.0e-17 ferric-chelate reductase / rubredoxin; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.487
rbr1
Putative phage DNA packaging protein; KEGG: cpr:CPR_0938 2.4e-33 periplasmic [Fe] hydrogenase 1 K00532; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.456
ngr
Rubredoxin; KEGG: ova:OBV_40800 4.0e-38 NADH peroxidase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.424
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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