STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA28704.1KEGG: edi:EDI_341030 7.8e-11 intracellular protein transport protein USO1; Psort location: Cellwall, score: 10.00. (4959 aa)    
Predicted Functional Partners:
KXA28705.1
Hypothetical protein.
       0.773
KXA29695.1
Signal peptide protein, YSIRK family; KEGG: lif:LINJ_16_1550 2.0e-19 putative kinesin.
  
     0.719
KXA31518.1
Efflux ABC transporter, permease protein; KEGG: bya:BANAU_0631 3.2e-07 macB; putative ABC-type transport system K02004; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.700
dinB_2
ImpB/MucB/SamB family protein; KEGG: ssr:SALIVB_0903 5.3e-162 dinB2; DNA polymerase IV 2 (Pol IV 2) K03502; Psort location: CytoplasmicMembrane, score: 8.16.
  
     0.660
KXA29920.1
DNA binding domain, excisionase family.
  
     0.646
KXA28708.1
LPXTG-motif protein cell wall anchor domain protein; Psort location: CytoplasmicMembrane, score: 9.55.
 
   
 0.617
KXA29631.1
SNARE-like domain protein; KEGG: hse:Hsero_2476 4.4e-07 cls; phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.610
KXA29697.1
Transcriptional regulator, TetR family; KEGG: bha:BH3415 4.6e-05 NADH dehydrogenase; K03885 NADH dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
  
     0.605
Int-Tn_2
Site-specific recombinase, phage integrase family; KEGG: bqy:MUS_1239 1.3e-25 ATP synthase C chain (lipid-binding protein)(dicyclohexylcarbodiimide-binding protein); Psort location: Cytoplasmic, score: 7.50; Belongs to the 'phage' integrase family.
 
     0.596
KXA30875.1
HDIG domain protein; KEGG: drt:Dret_2207 0.00065 phosphodiesterase K06950; Psort location: Cytoplasmic, score: 7.50.
  
     0.594
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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