STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA28532.1Iron-only hydrogenase maturation rSAM protein HydG; KEGG: hor:Hore_19320 1.2e-111 thiH; thiamine biosynthesis protein ThiH K03150; Psort location: Cytoplasmic, score: 7.50. (473 aa)    
Predicted Functional Partners:
KXA28531.1
Hydrogenase maturation GTPase HydF; KEGG: cce:Ccel_3486 3.4e-13 tRNA modification GTPase TrmE; K03650 tRNA modification GTPase; Psort location: Cytoplasmic, score: 7.50.
  
 0.988
KXA27812.1
KEGG: ddf:DEFDS_1615 2.6e-114 thiC; thiamine biosynthesis protein ThiC K03147; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.861
KXA28533.1
Iron-only hydrogenase maturation rSAM protein HydE; KEGG: sri:SELR_19500 5.2e-84 hypothetical protein; K01012 biotin synthetase; Psort location: Cytoplasmic, score: 7.50.
 
  
0.843
rsbV
STAS domain protein; KEGG: ter:Tery_1523 1.4e-06 anti-sigma-factor antagonist and sugar transfersase; Psort location: Cytoplasmic, score: 7.50.
  
    0.821
rsbU
Stage II sporulation protein E; KEGG: awo:Awo_c16830 3.2e-22 phosphoserine phosphatase; Psort location: Cytoplasmic, score: 7.50.
   
  
 0.817
KXA27809.1
KEGG: gvg:HMPREF0421_20554 5.1e-38 thiM2; hydroxyethylthiazole kinase K00878; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.746
spoIIAB
KEGG: fma:FMG_1043 4.8e-19 hypothetical protein; K04757 anti-sigma B factor; Psort location: Cytoplasmic, score: 7.50.
  
    0.621
rsbW
Hypothetical protein; KEGG: cdl:CDR20291_3551 1.6e-09 rsbW; anti-sigma-B factor (serine-protein kinase); K04757 anti-sigma B factor; Psort location: Cytoplasmic, score: 7.50.
  
    0.621
moeZ
ThiF family protein; KEGG: bpb:bpr_I2644 1.1e-42 thiF; thiamine biosynthesis protein ThiF.
  
  
 0.595
KXA31898.1
4Fe-4S binding domain protein; KEGG: hpk:Hprae_1780 1.9e-134 ferredoxin hydrogenase; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.527
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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