STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA28536.1Hypothetical protein; KEGG: ccb:Clocel_1853 2.5e-05 multi-sensor signal transduction histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR; Psort location: CytoplasmicMembrane, score: 10.00. (295 aa)    
Predicted Functional Partners:
trxB_1
KEGG: thx:Thet_1993 1.4e-92 thioredoxin reductase; K00384 thioredoxin reductase (NADPH); Psort location: Cytoplasmic, score: 9.97.
       0.556
phoU
Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake.
   
    0.499
sipS
KEGG: apr:Apre_1183 1.7e-30 signal peptidase I; K03100 signal peptidase I; Psort location: Cellwall, score: 8.75; Belongs to the peptidase S26 family.
  
    0.448
sipT
KEGG: cex:CSE_06110 2.9e-28 signal peptidase I K03100; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the peptidase S26 family.
   
    0.428
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.