Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KXA27730.1 | KXA28884.1 | HMPREF3229_01799 | HMPREF3229_01516 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein; KEGG: clp:CPK_ORF00408 0.0067 putative CDP-diacylglycerol--serine O-phosphatidyltransferase; K00998 phosphatidylserine synthase; Psort location: CytoplasmicMembrane, score: 10.00. | 0.433 |
| KXA27730.1 | ctc_1 | HMPREF3229_01799 | HMPREF3229_01801 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | Ribosomal protein L25, Ctc-form; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.466 |
| KXA27730.1 | mnmA | HMPREF3229_01799 | HMPREF3229_01800 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.441 |
| KXA27730.1 | nrnA_1 | HMPREF3229_01799 | HMPREF3229_01515 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | DHHA1 domain protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family. | 0.546 |
| KXA28884.1 | KXA27730.1 | HMPREF3229_01516 | HMPREF3229_01799 | Hypothetical protein; KEGG: clp:CPK_ORF00408 0.0067 putative CDP-diacylglycerol--serine O-phosphatidyltransferase; K00998 phosphatidylserine synthase; Psort location: CytoplasmicMembrane, score: 10.00. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.433 |
| KXA28884.1 | nrnA_1 | HMPREF3229_01516 | HMPREF3229_01515 | Hypothetical protein; KEGG: clp:CPK_ORF00408 0.0067 putative CDP-diacylglycerol--serine O-phosphatidyltransferase; K00998 phosphatidylserine synthase; Psort location: CytoplasmicMembrane, score: 10.00. | DHHA1 domain protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family. | 0.854 |
| ctc_1 | KXA27730.1 | HMPREF3229_01801 | HMPREF3229_01799 | Ribosomal protein L25, Ctc-form; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.466 |
| ctc_1 | mnmA | HMPREF3229_01801 | HMPREF3229_01800 | Ribosomal protein L25, Ctc-form; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.798 |
| mnmA | KXA27730.1 | HMPREF3229_01800 | HMPREF3229_01799 | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.441 |
| mnmA | ctc_1 | HMPREF3229_01800 | HMPREF3229_01801 | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | Ribosomal protein L25, Ctc-form; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.798 |
| nrnA_1 | KXA27730.1 | HMPREF3229_01515 | HMPREF3229_01799 | DHHA1 domain protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.546 |
| nrnA_1 | KXA28884.1 | HMPREF3229_01515 | HMPREF3229_01516 | DHHA1 domain protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family. | Hypothetical protein; KEGG: clp:CPK_ORF00408 0.0067 putative CDP-diacylglycerol--serine O-phosphatidyltransferase; K00998 phosphatidylserine synthase; Psort location: CytoplasmicMembrane, score: 10.00. | 0.854 |