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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
birAbiotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. (326 aa)    
Predicted Functional Partners:
KXA29691.1
KEGG: lru:HMPREF0538_20007 5.3e-20 accB; acetyl-CoA carboxylase biotin carboxyl carrier subunit K02160; Psort location: Cytoplasmic, score: 7.50.
 
 
 
 0.962
KXA29690.1
Putative acetyl-CoA carboxylase, biotin carboxylase subunit; KEGG: cbi:CLJ_B3925 1.9e-118 accC; biotin carboxylase K01961; Psort location: Cytoplasmic, score: 7.50.
  
 0.957
cfiB
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
 
 0.936
gcdC
glutaconyl-CoA decarboxylase subunit gamma; KEGG: afn:Acfer_1835 1.2e-31 biotin/lipoyl attachment domain-containing protein; K01615 glutaconyl-CoA decarboxylase.
 
  
 0.932
gcdA
glutaconyl-CoA decarboxylase subunit alpha; KEGG: afn:Acfer_1817 9.0e-231 carboxyl transferase; K01615 glutaconyl-CoA decarboxylase; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.924
KXA29688.1
KEGG: lgr:LCGT_0523 1.6e-64 acetyl-CoA carboxylase carboxyl transferase subunit alpha; K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.921
KXA29689.1
KEGG: cbi:CLJ_B3924 5.2e-61 accD; acetyl-CoA carboxylase, carboxyl transferase subunit beta K01963; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.907
cca
tRNA nucleotidyltransferase/poly(A) polymerase family protein; KEGG: cbf:CLI_2365 3.5e-94 poly(A) polymerase; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme); Psort location: Cytoplasmic, score: 7.50.
  
 0.885
tadA
Cytidine and deoxycytidylate deaminase zinc-binding region; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
  
 0.852
ydiC
Universal bacterial protein YeaZ; KEGG: snc:HMPREF0837_10435 1.8e-28 gcp; M22 family O-sialoglycoprotein endopeptidase.
  
    0.830
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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