STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yegWKEGG: bcz:BCZK3833 8.8e-11 GntR family transcriptional regulator K07979; Psort location: Cytoplasmic, score: 7.50. (119 aa)    
Predicted Functional Partners:
ecsA_2
KEGG: sgg:SGGBAA2069_c09610 1.3e-48 ABC transporter ATP-binding protein K01990; Psort location: CytoplasmicMembrane, score: 8.78.
 
  
 0.981
KXA27749.1
Hypothetical protein; KEGG: snc:HMPREF0837_11958 0.0082 ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.922
ecfA2_2
ABC transporter, ATP-binding protein; KEGG: suq:HMPREF0772_11208 2.2e-44 ABC superfamily ATP binding cassette transporter, ABC protein; Psort location: CytoplasmicMembrane, score: 8.78.
 
  
 0.691
yvoA
Transcriptional regulator, GntR family; KEGG: ppo:PPM_0985 4.6e-14 ytrA; histidine utilization repressor; Psort location: Cytoplasmic, score: 7.50.
  
     0.663
KXA27752.1
Hypothetical protein.
       0.493
ispE
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
       0.480
KXA27747.1
Hypothetical protein; KEGG: pta:HPL003_01915 0.00030 glutamate racemase; K01776 glutamate racemase; Psort location: Cytoplasmic, score: 7.50.
       0.468
KXA27753.1
AspT/YidE/YbjL antiporter duplication domain protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.430
cobB
Putative NAD-dependent deacetylase; KEGG: ttm:Tthe_1994 1.2e-70 silent information regulator protein Sir2; K12410 NAD-dependent deacetylase; Psort location: Cytoplasmic, score: 7.50.
  
    0.402
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.