STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lolD_1ABC transporter, ATP-binding protein; KEGG: taz:TREAZ_2826 8.5e-84 macrolide export ATP-binding/permease MacB 1/2 K02003; Psort location: CytoplasmicMembrane, score: 9.96. (239 aa)    
Predicted Functional Partners:
macB_4
Efflux ABC transporter, permease protein; KEGG: car:cauri_0317 8.2e-63 yknZ; Macrolide export ATP-binding/permease macB K02004; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.992
ebh_1
Efflux ABC transporter, permease protein; KEGG: sgg:SGGBAA2069_c11620 1.1e-89 putative ABC transporter permease K02004; Psort location: CytoplasmicMembrane, score: 8.19.
  
 
 0.986
macB_1
Efflux ABC transporter, permease protein; KEGG: ase:ACPL_2325 2.9e-12 Macrolide export ATP-binding/permease protein macB K02004; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.976
macB_2
Efflux ABC transporter, permease protein; KEGG: prw:PsycPRwf_1834 4.8e-11 ABC transporter-like protein; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.974
KXA27764.1
Efflux ABC transporter, permease protein; KEGG: cha:CHAB381_1081 9.9e-09 macrolide export ATP-binding/permease protein MacB K05685; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.971
KXA27769.1
Hypothetical protein; KEGG: asm:MOUSESFB_0415 0.0018 type IV leader peptidase family protein; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.957
KXA27765.1
Hypothetical protein; KEGG: ddh:Desde_3673 0.00018 flavocytochrome c; K00244 fumarate reductase flavoprotein subunit.
 
     0.924
tpd
Hypothetical protein.
 
    0.910
efeU
Iron permease FTR1 family protein; KEGG: ccv:CCV52592_0433 3.9e-47 fumarate hydratase class II K01679; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.906
ecsA_2
KEGG: sgg:SGGBAA2069_c09610 1.3e-48 ABC transporter ATP-binding protein K01990; Psort location: CytoplasmicMembrane, score: 8.78.
  
0.848
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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