close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
artP_3ABC transporter, substrate-binding protein, family 3; KEGG: eci:UTI89_C2121 5.4e-27 fliY; cystine transporter subunit K02424. (305 aa)    
Predicted Functional Partners:
yecS_1
Putative arginine ABC transporter, permease protein ArtQ; KEGG: rcm:A1E_00665 9.6e-37 sdhA; succinate dehydrogenase flavoprotein subunit K02029; Psort location: CytoplasmicMembrane, score: 10.00.
 0.999
artM_2
Arginine ABC transporter, ATP-binding protein ArtM; KEGG: cno:NT01CX_0934 1.3e-89 ABC transporter; K02028 polar amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
 0.994
yecS_2
ABC transporter, permease protein; KEGG: clo:HMPREF0868_1418 2.9e-51 ABC transporter ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein K02029; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.992
artM_3
Arginine ABC transporter, ATP-binding protein ArtM; KEGG: drm:Dred_2233 2.9e-83 ABC transporter-like protein; K02028 polar amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
 0.880
ynhG
ErfK/YbiS/YcfS/YnhG; KEGG: bmq:BMQ_1029 1.0e-17 putative peptidoglycan binding domain-containing protein.
       0.631
uvrB
Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]
       0.604
uvrA
Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
     
 0.603
ywrD
Putative gamma-glutamyltransferase; KEGG: clj:CLJU_c19030 7.0e-144 ggt; gamma-glutamyltranspeptidase K00681; Psort location: Extracellular, score: 9.60.
  
  
 0.600
KXA29677.1
Rubredoxin; KEGG: ova:OBV_16090 8.6e-242 acyl-CoA dehydrogenase/protein FixB; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.450
prkC
Putative serine/threonine-protein kinase PrkC; KEGG: ctc:CTC01225 4.9e-104 serine/threonine protein kinase K08884; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.422
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
Server load: low (28%) [HD]