STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA27810.1KEGG: ccl:Clocl_3523 2.8e-62 phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; Psort location: Cytoplasmic, score: 7.50. (268 aa)    
Predicted Functional Partners:
KXA27809.1
KEGG: gvg:HMPREF0421_20554 5.1e-38 thiM2; hydroxyethylthiazole kinase K00878; Psort location: Cytoplasmic, score: 7.50.
  
 0.998
KXA27812.1
KEGG: ddf:DEFDS_1615 2.6e-114 thiC; thiamine biosynthesis protein ThiC K03147; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.964
KXA27811.1
Protein ThiW; KEGG: cpy:Cphy_3701 3.5e-07 heptaprenyl diphosphate synthase component I; K00805 heptaprenyl diphosphate synthase; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.832
moeZ
ThiF family protein; KEGG: bpb:bpr_I2644 1.1e-42 thiF; thiamine biosynthesis protein ThiF.
  
  
 0.707
KXA31051.1
HAD hydrolase, family IA, variant 3; KEGG: bde:BDP_1275 1.5e-22 haloacid dehalogenase; Psort location: Cytoplasmic, score: 7.50.
      0.680
cshA
KEGG: apr:Apre_1083 6.4e-134 DEAD/DEAH box helicase; K05592 ATP-dependent RNA helicase DeaD; Psort location: Cytoplasmic, score: 9.97.
 
   0.618
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
    0.577
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
  
 0.521
KXA28532.1
Iron-only hydrogenase maturation rSAM protein HydG; KEGG: hor:Hore_19320 1.2e-111 thiH; thiamine biosynthesis protein ThiH K03150; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.517
iap_5
Phage tail component protein; KEGG: tva:TVAG_387410 1.7e-20 viral A-type inclusion protein; K02331 DNA polymerase phi subunit; Psort location: Extracellular, score: 9.72.
  
    0.502
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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