STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD49560.1Glutaredoxin-like domain. (172 aa)    
Predicted Functional Partners:
SFD49580.1
Protein-disulfide isomerase.
       0.788
YfgC
Putative Zn-dependent protease, contains TPR repeats.
  
    0.720
AspC_2
Aspartate/methionine/tyrosine aminotransferase.
       0.512
SFD61621.1
Disulfide bond formation protein DsbB.
  
 
 0.418
BdbC
Disulfide bond formation protein DsbB; Belongs to the DsbB family.
  
 
 0.418
DsbD_4
Thioredoxin-like.
  
 
 0.403
DsbD_3
Cytochrome C biogenesis protein transmembrane region.
  
 
 0.403
DsbD_6
Suppressor for copper-sensitivity B.
  
 
 0.403
Your Current Organism:
Roseovarius indicus
NCBI taxonomy Id: 540747
Other names: CCTCC AB 208233, DSM 26383, LMG 24622, LMG:24622, MCCC 1A01227, R. indicus, Roseovarius indicus Lai et al. 2011, Roseovarius sp. B108, strain 2PR52-14, strain B108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.