STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amt_2Ammonium transporter. (443 aa)    
Predicted Functional Partners:
GlnK
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
 
 
 0.979
GlnB
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
 
 0.977
GltB_2
Glutamate synthase (NADPH) large subunit.
 
  
 0.841
GlnL
Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL.
  
 
 0.570
AcnA
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 
 0.511
chlL
Ferredoxin protochlorophyllide reductase subunit L; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP.
  
  
 0.489
BarA
Hypothetical protein.
 
 
 0.488
PbpG_1
Penicillin-binding protein, 1A family.
       0.471
Cph2
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
    
 0.470
bchB
Ferredoxin protochlorophyllide reductase subunit B; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex.
  
  
 0.444
Your Current Organism:
Roseovarius indicus
NCBI taxonomy Id: 540747
Other names: CCTCC AB 208233, DSM 26383, LMG 24622, LMG:24622, MCCC 1A01227, R. indicus, Roseovarius indicus Lai et al. 2011, Roseovarius sp. B108, strain 2PR52-14, strain B108
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