STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD94247.1Protein of unknown function. (181 aa)    
Predicted Functional Partners:
SFD94258.1
Hypothetical protein.
       0.687
YdaD_2
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
    0.623
SFE34144.1
Protein of unknown function.
 
     0.572
SFD59918.1
Sodium/proton antiporter, CPA1 family.
 
    0.551
SFD94232.1
Hypothetical protein.
       0.545
SFD75969.1
Protein of unknown function.
 
     0.515
SFE71138.1
Protein of unknown function.
 
     0.495
SFD94274.1
Hypothetical protein.
       0.484
HcrB
Xanthine dehydrogenase YagS FAD-binding subunit.
  
    0.484
MdeA
O-acetylhomoserine sulfhydrylase.
       0.436
Your Current Organism:
Roseovarius indicus
NCBI taxonomy Id: 540747
Other names: CCTCC AB 208233, DSM 26383, LMG 24622, LMG:24622, MCCC 1A01227, R. indicus, Roseovarius indicus Lai et al. 2011, Roseovarius sp. B108, strain 2PR52-14, strain B108
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.