STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE41179.14Fe-4S dicluster domain-containing protein. (647 aa)    
Predicted Functional Partners:
SFE41248.1
Chaperone TorD involved in molybdoenzyme TorA maturation.
 
  
 0.952
SFE41202.1
Protein of unknown function.
 
    0.921
SFE41221.1
Protein of unknown function.
 
     0.917
FdhB1
Formate dehydrogenase beta subunit.
 
   
 0.912
SFD62217.1
Indolepyruvate ferredoxin oxidoreductase.
  
  
 0.909
SFE41261.1
Formate dehydrogenase region TAT target.
 
   
 0.888
SFE73108.1
Hydrogenase large subunit.
  
 
 0.888
FdhF
Formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   
 0.872
FdoI
Formate dehydrogenase subunit gamma.
 
   
 0.869
SFE41069.1
Hypothetical protein.
 
     0.865
Your Current Organism:
Roseovarius indicus
NCBI taxonomy Id: 540747
Other names: CCTCC AB 208233, DSM 26383, LMG 24622, LMG:24622, MCCC 1A01227, R. indicus, Roseovarius indicus Lai et al. 2011, Roseovarius sp. B108, strain 2PR52-14, strain B108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.