STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORS3428_00725Cupin. (134 aa)    
Predicted Functional Partners:
ORS3428_11320
Amidohydrolase.
    
  0.561
ORS3428_30785
Amidohydro-rel domain-containing protein.
    
  0.561
ORS3428_30865
annotation not available
    
  0.561
ORS3428_00730
Sulfonate ABC transporter ATP-binding protein.
       0.537
ORS3428_00745
Nitrate ABC transporter.
       0.415
ORS3428_00740
ABC transporter permease.
       0.412
ORS3428_00735
DUF559 domain-containing protein.
       0.402
Your Current Organism:
Mesorhizobium sp. ORS3428
NCBI taxonomy Id: 540997
Other names: M. sp. ORS 3428, Mesorhizobium sp. ORS 3428
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