STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORS3428_04325Cytochrome; Belongs to the cytochrome P450 family. (412 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
    
 0.982
ORS3428_25650
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.978
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.960
ORS3428_00045
Ferredoxin--NADP(+) reductase.
 
 0.955
ORS3428_29070
2Fe-2S ferredoxin.
 
 0.935
ORS3428_06275
2Fe-2S ferredoxin.
 
 0.933
ORS3428_11305
CDP-6-deoxy-delta-3,4-glucoseen reductase.
  
 0.928
ORS3428_26935
Oxidoreductase.
  
 0.884
ORS3428_22855
AAA_23 domain-containing protein.
    
 0.878
ORS3428_20845
Metallophos domain-containing protein.
    
 0.877
Your Current Organism:
Mesorhizobium sp. ORS3428
NCBI taxonomy Id: 540997
Other names: M. sp. ORS 3428, Mesorhizobium sp. ORS 3428
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.