Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ORS3428_00045 | ORS3428_00670 | ORS3428_00045 | ORS3428_00670 | Ferredoxin--NADP(+) reductase. | Dihydropyrimidine dehydrogenase subunit B. | 0.754 |
ORS3428_00045 | ORS3428_02275 | ORS3428_00045 | ORS3428_02275 | Ferredoxin--NADP(+) reductase. | Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.875 |
ORS3428_00045 | ORS3428_08865 | ORS3428_00045 | ORS3428_08865 | Ferredoxin--NADP(+) reductase. | Glutamine amidotransferase. | 0.809 |
ORS3428_00045 | ORS3428_09345 | ORS3428_00045 | ORS3428_09345 | Ferredoxin--NADP(+) reductase. | Glutamate synthase subunit alpha. | 0.849 |
ORS3428_00045 | ORS3428_10265 | ORS3428_00045 | ORS3428_10265 | Ferredoxin--NADP(+) reductase. | Glutamine amidotransferase. | 0.820 |
ORS3428_00045 | ORS3428_11305 | ORS3428_00045 | ORS3428_11305 | Ferredoxin--NADP(+) reductase. | CDP-6-deoxy-delta-3,4-glucoseen reductase. | 0.889 |
ORS3428_00045 | ORS3428_26935 | ORS3428_00045 | ORS3428_26935 | Ferredoxin--NADP(+) reductase. | Oxidoreductase. | 0.685 |
ORS3428_00045 | gltD | ORS3428_00045 | ORS3428_09350 | Ferredoxin--NADP(+) reductase. | Glutamate synthase. | 0.970 |
ORS3428_00670 | ORS3428_00045 | ORS3428_00670 | ORS3428_00045 | Dihydropyrimidine dehydrogenase subunit B. | Ferredoxin--NADP(+) reductase. | 0.754 |
ORS3428_00670 | ORS3428_09345 | ORS3428_00670 | ORS3428_09345 | Dihydropyrimidine dehydrogenase subunit B. | Glutamate synthase subunit alpha. | 0.845 |
ORS3428_00670 | ORS3428_11305 | ORS3428_00670 | ORS3428_11305 | Dihydropyrimidine dehydrogenase subunit B. | CDP-6-deoxy-delta-3,4-glucoseen reductase. | 0.999 |
ORS3428_00670 | ORS3428_26935 | ORS3428_00670 | ORS3428_26935 | Dihydropyrimidine dehydrogenase subunit B. | Oxidoreductase. | 0.754 |
ORS3428_00670 | gltD | ORS3428_00670 | ORS3428_09350 | Dihydropyrimidine dehydrogenase subunit B. | Glutamate synthase. | 0.995 |
ORS3428_02275 | ORS3428_00045 | ORS3428_02275 | ORS3428_00045 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Ferredoxin--NADP(+) reductase. | 0.875 |
ORS3428_02275 | ORS3428_06275 | ORS3428_02275 | ORS3428_06275 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 2Fe-2S ferredoxin. | 0.744 |
ORS3428_02275 | ORS3428_08865 | ORS3428_02275 | ORS3428_08865 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Glutamine amidotransferase. | 0.715 |
ORS3428_02275 | ORS3428_09345 | ORS3428_02275 | ORS3428_09345 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Glutamate synthase subunit alpha. | 0.927 |
ORS3428_02275 | ORS3428_10265 | ORS3428_02275 | ORS3428_10265 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Glutamine amidotransferase. | 0.715 |
ORS3428_02275 | ORS3428_11305 | ORS3428_02275 | ORS3428_11305 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | CDP-6-deoxy-delta-3,4-glucoseen reductase. | 0.868 |
ORS3428_02275 | ORS3428_26935 | ORS3428_02275 | ORS3428_26935 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Oxidoreductase. | 0.875 |
page 1 of 4