STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potA-5Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (367 aa)    
Predicted Functional Partners:
ORS3428_09820
ABC transporter permease.
 
  0.990
ORS3428_09830
Putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 
  0.985
ORS3428_09825
Spermidine/putrescine ABC transporter permease PotC.
 
 
  0.978
ORS3428_08710
Spermidine/putrescine ABC transporter.
  
  0.971
ORS3428_04530
Spermidine/putrescine ABC transporter permease.
  
  0.970
ORS3428_00415
Peptide ABC transporter permease.
  
  0.956
ORS3428_08085
ABC transporter permease.
  
  0.953
ORS3428_28940
Uncharacterized protein.
 
 0.950
ORS3428_21265
ABC transporter permease.
  
  0.947
ORS3428_18140
ABC transporter permease.
  
  0.946
Your Current Organism:
Mesorhizobium sp. ORS3428
NCBI taxonomy Id: 540997
Other names: M. sp. ORS 3428, Mesorhizobium sp. ORS 3428
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